References
- Amagai, Y., Martinek, P., Watanabe, N., Kuboyama, T. (2014). Microsatellite mapping of genes for branched spike and soft glumes in Triticum monococcum L. Genet. Resour. Crop Ev., 61 (2), 465–471.
- Anonymous (2015). FAOSTAT.FAO, Rome, Italy. Available at: http://faostat.fao.org (accessed 15 August 2016).
- Antonyuk, M. Z., Prokopyk, D. O., Martynenko, V. S., Ternovska, T. K. (2012). Identification of the genes promoting awnedness in the Triticum aestivum/Aegilops umbellulata introgressive line. Cytol. Genet., 46 (3), 136–143.
- Ariel, F. D., Manavella, P. A., Dezar, C. A., Chan, R. L. (2007). The true story of the HD-Zip family. Trends Plant Sci., 12 (9), 419–426.
- Boden, S. A., Cavanagh, C., Cullis, B. R., Ramm, K., Greenwood, J., Finnegan, E. J., Trevaskis, B., Swain, S. M. (2015). Ppd-1 is a key regulator of inflorescence architecture and paired spikelet development in wheat. Nat. Plants, 1, doi: 10.1038/nplants.2014.16
- Chen, Q. F., Yen, C., Yang, J. L. (1998). Chromosome location of the gene for the hulled character in the Tibetan weedrace of common wheat. Genet. Resour. Crop Ev., 45, 407–410.
- Chen, X. (2004). A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development. Science, 303, 2022–2025.
- Chuck, G., Meeley, R., Irish, E., Sakai, H., Hake, S. (2007). The maize tasselseed4 microRNA controls sex determination and meristem cell fate by targeting Tasselseed6/indeterminate spikelet1. Nat. Genet., 39 (12), 1517–1521.
- Dobrovolskaya, O., Martinek, P., Voylokov, A. V., Korzun, V., Roder, M. S., Borner, A. (2009). Microsatellite mapping of genes that determine supernumerary spikelets in wheat (T. aestivum) and rye (S. cereale). Theor. Appl. Genet., 119 (5), 867–874.
- Dobrovolskaya, O., Pont, C., Sibout, R., Martinek, P., Badaeva, E., Murat, F., Chosson, A., Watanabe, N., Prat, E., Gautier, N., Gautier, V., Poncet, C., Orlov. Y. L., Krasnikov, A. A., Berges, H., Salina, E., Laikova, L., Salse, J. (2015). FRIZZY PANICLE drives supernumerary spikelets in bread wheat. Plant Physiol., 167 (1), 189–99.
- Doebley, J. F., Gaut, B. S., Smith, B. D. (2006). The molecular genetics of crop domestication. Cell, 127 (7), 1309–1321.
- Dorofeev, V.F., Korovina, O. N. (1979). Wheat. Flora of Cultivated Plants, Vol. 1. [Дорофеев В. Ф., Коровина О. Н. Культурная флора СССР. Т. 1. Пшеница.] Kolos, Leningrad. 347 pp. (in Russian).
- Faris, J. D., Gill, B. S. (2002). Genomic targeting and high-resolution mapping of the domestication gene. Genome, 45, 706–718.
- Faris, J. D., Fellers, J. P., Brooks, S. A., Gill, B. S. (2003). A bacterial artificial chromosome contig spanning the major domestication locus Q in wheat and identification of a candidate gene. Genetics, 164 (1), 311–321.
- Franckowiack, J. D., Konishi, T. (1997). Naked caryopsis. Barley Genetics Newsletter, 26, 51–52.
- Gepts, P. (2004). Crop domestication as a long-term Selection Experiment. Plant Breeding, 24 (2), 1–44.
- Gill, B. S., Appels, R., Botha-Oberholster, A. M., Buell, C. R., Bennetzen, J. L., Chalhoub, B., Chumley, F., Dvorak, J., Iwanaga, M., Keller, B., Li, W., McCombie, W. R., Ogihara, Y., Quetier, F., Sasaki, T. (2004). A workshop report on wheat genome sequencing: International genome research on wheat consortium. Genetics, 168 (2), 1087–1096.
- Glémin, S., Bataillon, T. (2009). A comparative view of the evolution of grasses under domestication: Tansley review. New Phytol., 183 (2), 273–290.
- Goncharov, N. P. (1997). Comparative genetic study of tetraploid forms of common wheat without D genome. Russ. J. Genet., 33, 549–552.
- Goncharov, N. P., Mitina, R. L., Anfilova, N. A. (2003). Inheritance of awnlessness in tetraploid wheat species. Russ. J. Genet., 39 (4), 463–466.
- Goncharov, N. P., Gaidalenok, R. F. (2005). Localization of genes controlling spherical grain and compact ear in Triticum antiquorum Heer ex Udacz. Russ. J. Genet., 41 (11), 1262–1267.
- Goncharov, N. P., Bannikova, S. V., Kawahara, T. (2007a). Wheat artificial amphiploids involving the Triticum timopheevii genome: Their studies, preservation and reproduction. Genet. Resour. Crop Ev., 54 (7), 1507–1516.
- Goncharov, N. P., Kondratenko, E. Y., Bannikova, S. V, Konovalov, A. A., Golovnina, K. A. (2007b). Comparative genetic analysis of diploid naked wheat Triticum sinskajae and the progenitor T. monococcum accession. Russ. J. Genet., 43 (11), 1248–1256.
- Goncharov, N. P. (2011). Genus Triticum L. taxonomy: The present and the future. Plant Syst. Evol., 295 (1), 1–11.
- Goncharov, N. P. (2012) Comparative Genetics of Wheats and Their Related Species. [Гончаров Н. П. Сравнительная генетика пшениц и их сородичей.] GEO, Novosibirsk. 523 pp. (in Russian).
- Gross, B. L., Olsen, K. M. (2010). Genetic perspectives on crop domestication. Trends Plant Sci., 15 (9), 529–537.
- Gu, X. Y., Kianian, S. F., Foley, M. E. (2004). Multiple loci and epistases control genetic variation for seed dormancy in weedy rice (Oryza sativa). Genetics, 166 (3), 1503–1516.
- Hammer, K. (1984). Das Domestikationssyndrom. Die Kulturpflanze, 32 (1), 11–34.
- Haque, M. A., Takayama, A., Watanabe, N., Kuboyama, T. (2011) Cytological and genetic mapping of the gene for four-awned phenotype in Triticum carthlicum Nevski. Genet. Resour. Crop Evol.,58 (7), 1087–1093.
- Houston, K., McKim, S. M., Comadran, J., Bonar, N., Druka, I., Uzrek, N., Cirillo, E., Guzy-Wrobelska, J., Collins, N. C., Halpin, C., Hansson, M., Dockter, C., Druka, A., Waugh, R. (2013). Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence. P. Natl. Acad. Sci. USA, 110 (41), 16675–16680.
- Jantasuriyarat, C., Vales, M. I., Watson, C. J. W., Riera-Lizarazu, O. (2004). Identification and mapping of genetic loci affecting the free-threshing habit and spike compactness in wheat (Triticum aestivum L.). Theor. Appl. Genet., 108 (2), 261–273.
- Johnson, E. B., Nalam, V. J., Zemetra, R. S., Riera-Lizarazu, O. (2008). Mapping the compactum locus in wheat (Triticum aestivum L.) and its relationship to other spike morphology genes of the Triticeae. Euphytica, 163 (2), 193–201.
- Kato, K., Miura, H., Sawada, S. (1999). QTL mapping of genes controlling ear emergence time and plant height on chromosome 5A of wheat. Theor. Appl. Genet., 98, 472–477.
- Kerber, E. R., Rowland, G. G. (1974). Origin of the free threshing character in hexaploid wheat. Can. J. Genet. Cytol., 16 (1), 145–154.
- Kimber, G., Feldman, M. (1987). Wild Wheat: An Introduction. College of Agriculture, University of Missouri-Columbia, Columbia, Mo. 146 pp.
- Kimber, G., Sears, E. R. (1987). Evolution in the genus Triticum and the origin of cultivated wheat. In: Heyne, E. G. (Ed.). Wheat and Wheat Improvement. 2nd edn. American Society of Agronomy, Madison, WI, pp. 154–164.
- Klindworth, D. L., Williams, N. D., Joppa, L. R. (1990). Chromosomal location of genes for supernumerary spikelet in tetraploid wheat. Genome, 33 (4), 515–520.
- Klindworth, D. L., Klindworth, M. M., Williams, N. D. (1997). Telosomic mapping of four genetic markers in durum wheat. J. Hered., 88 (3), 229–232.
- Komatsuda, T., Mano, Y. (2002). Molecular mapping of the intermedium spike-c (int-c) and non-brittle rachis 1 (btr1) loci in barley (Hordeum vulgare L.). Theor. Appl. Genet., 105 (1), 85–90.
- Komatsuda, T., Pourkheirandish, M., He, C., Azhaguvel, P., Kanamori, H., Perovic, D., Stein, N., Graner, A., Wicker, T., Tagiri, A., Lundqvist, U., Fujimura, T., Matsuoka, M., Matsumoto, T., Yano, M. (2007). Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene. Proc. Natl. Acad. Sci. USA, 104 (4), 1424–1429.
- Koppolu, R., Anwar, N., Sakuma, S., Tagiri, A., Lundqvist, U., Pourkheirandish, M., Rutten, T., Seiler, C., Himmelbach, A., Ariyadasa, R., Youssef, H. M., Stein, N., Sreenivasulu, N., Komatsuda, T., Schnurbusch, T. (2013). Six-rowed spike4 (Vrs4) controls spikelet determinacy and row-type in barley. Proc. Natl. Acad. Sci. USA, 110 (32), 13198–203.
- Kosuge, K., Watanabe, N., Kuboyama, T., Melnik, V. M., Yanchenko, V. I., Rosova, M. A., Goncharov, N. P. (2008). Cytological and microsatellite mapping of mutant genes for spherical grain and compact spikes in durum wheat. Euphytica, 159 (3), 289–296.
- Lebedeva, T. V., Rigin, B. V. (1994). Inheritance of some morphological traits, growth habit and powdery mildew resistance in cultivated einkorn Triticum monococcum L. Russ. J. Genet.,30, 1599–1604.
- Lenser, T., Theißen, G. (2013). Molecular mechanisms involved in convergent crop domestication. Trends in Plant Sci., 18 (12), 704–714.
- Lev-Yadun, S., Gopher, A., Abbo, S. (2000). The cradle of agriculture. Science, 288, 1602–1603.
- Li, W., Gill, B. S. (2006). Multiple genetic pathways for seed shattering in the grasses. Funct. Integr. Genom., 6 (4), 300–309.
- MacKey, J. (1954). Neutron and X-ray experiments in wheat and a revision of the speltoid problem. Hereditas, 40, 65–180.
- Malinowski, E. (1914). Les hybrides du froment. Bull. del’Acad. Sci. Cracovie, Ser. B Sci. Naturalis, 3, 410–450.
- Maydup, M. L., Antonietta, M., Guiamet, J. J., Graciano, C., Lopez, J. R., Tambussi, E. A. (2010). The contribution of ear photosynthesis to grain filling in bread wheat (Triticum aestivum L.). Field Crop. Res., 119 (1), 48–58.
- Muller, K. J., Romano, N., Gerstner, O., Garcia-Maroto, F., Pozzi, C., Salamini, F., Rohde, W. (1995). The barley Hooded mutation caused by a duplication in homeobox gene intron. Nature, 374, 727–730.
- Muramatsu, M. (1963). Dosage effect of the spelta gene q of hexaploid wheat. Genetics, 48, 469–482.
- Nalam, V. J., Vales, M. I., Watson, C. J. W., Kianian, S. F., Riera-Lizarazu, O. (2006). Map-based analysis of genes affecting the brittle rachis character in tetraploid wheat (Triticum turgidum L.). Theor. Appl. Genet., 112 (2), 373–381.
- Pennell, A. L., Halloran, G. M. (1983). Inheritance of supernumerary spikelets in wheat. Euphytica, 32 (3), 767–776.
- Pourkheirandish, M., Wicker, T., Stein, N., Fujimura, T., Komatsuda, T. (2007). Analysis of the barley chromosome 2 region containing the six-rowed spike gene vrs1 reveals a breakdown of rice-barley micro collinearity by a transposition. Theor. Appl. Genet., 114 (8), 1357–1365.
- Poursarebani, N., Seidensticker, T., Koppolu, R., Trautewig, C., Gawroński, P., Bini, F., Govind, G., Rutten, T., Sakuma, S., Tagiri, A., Wolde, G. M., Youssef, H. M., Battal, A., Ciannamea, S., Fusca, T., Nussbaumer, T., Pozzi, C., Borner, A., Lundqvist, U., Komatsuda, T., Salvi, S., Tuberosa, R., Uauy, C., Sreenivasulu, N., Rossini, L., Schnurbusch, T. (2015). The genetic basis of composite spike form in barley and “miracle-wheat.” Genetics, 201 (1), 155–165.
- Ramsay, L., Comadran, J., Druka, A., Marshall, D. F., Thomas, W. T. B., Macaulay, M., MacKenzie, K., Simpson, C., Fuller, J., Bonar, N., Hayes, P. M., Lundqvist, U., Franckowiak, J. D., Close, T. J., Muehlbauer, G. J., Waugh, R. (2011). INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1. Nature Genet., 43 (2), 169–172.
- Rao, M. V. P. (1972). Mapping of the compactum gene C on chromosome 2D of wheat. Wheat. Inf. Serv., 35, 9.
- Rao, M. V. P. (1981). Telocentric mapping of the awn inhibitor gene Hd on chromosome 4B of common wheat. Cereal Res. Comm., 9, 335–337.
- Rebetzke, G. J., Bonnett, D. G., Reynolds, M. P. (2016). Awns reduce grain number to increase grain size and harvestable yield in irrigated and rainfed spring wheat. J. Exp. Bot., 67(9), 2573–2586.
- Reynolds, M., Tuberosa, R. (2008). Translational research impacting on crop productivity in drought-prone environments. Curr. Opin. Plant Biol., 11 (2), 171–179.
- Rowland, G. G., Kerber, E. R. (1974). Telocentric mapping in hexaploid wheat of genes for leaf resistance and other characters derived from Aegilops squarrose. Can. J. Genet. Cytol., 16, 137–144.
- Sakuma, S., Pourkheirandish, M., Matsumoto, T., Koba, T., Komatsuda, T. (2010). Duplication of a well-conserved homeodomain-leucine zipper transcription factor gene in barley generates a copy with more specific functions. Funct. Integr. Genom., 10 (1), 123–133.
- Santi, L., Wang, Y., Stile, M. R., Berendzen, K., Wanke, D., Roig, C., Pozzi, C., Muller, K., Muller, J., Rohde, W., Salamini, F. (2003). The GA octodinucleotide repeat binding factor BBR participates in the transcriptional regulation of the homeobox gene Bkn3. Plant J., 34 (6), 813–826.
- Sears, E. R. (1947). The sphaerococcum gene in wheat. Genetics,32, 102–103.
- Sears, E. R. (1954). The aneuplolds of common wheat. Missouri Agr. Exp. Sta. Res. Bull., 572, 1–58.
- Sears, E. R. (1966). Chromosome mapping with the aid of telocentrics. Proc. 2nd International Wheat Geneties Symposium, Hereditas Suppl.,2, 370–381.
- Sessa, G., Carabelli, M., Ruberti, I., Lucchetti, S., Baima, S., Morelli, G. (1994). Identification of distinct families of HD-Zip proteins in Arabidopsis thaliana. In: G. Coruzzi, P. Puigdomčnech (eds.). Plant Molecular Biology: Molecular Genetic Analysis of Plant Development and Metabolism. Springer, Berlin, Heidelberg, pp. 411–426.
- Simonetti, M. C., Bellomo, M. P., Laghetti, G., Perrino, P., Simeone, R., Blanco, A. (1999). Quantitative trait loci influencing free-threshing habit in tetraploid wheats. Genet. Resour. Crop Ev., 46 (3), 267–271.
- Simons, K. J., Fellers, J. P., Trick, H. N., Zhang, Z., Tai, Y. S., Gill, B. S., Faris, J. D. (2006). Molecular characterization of the major wheat domestication gene Q. Genetics, 172 (1), 547–555.
- Sood, S., Kuraparthy, V., Bai, G., Dhaliwal, H. S., Gill, B. S. (2007) Molecular mapping of soft glume (Sog) gene in diploid wheat. In: Abstracts of the Plant & Animal Genomes XV Conference, 13–17 January 2007, San Diego, CA, p. 282.
- Sood, S., Kuraparthy, V., Bai, G., Gill, B. S. (2009). The major threshability genes soft glume (sog) and tenacious glume (Tg), of diploid and polyploid wheat, trace their origin to independent mutations at non-orthologous loci. Theor. Appl. Genet., 119 (2), 341–351.
- Sormacheva, I., Golovnina, K., Vavilova, V., Kosuge, K., Watanabe, N., Blinov, A., Goncharov, N. P. (2015). Q gene variability in wheat species with different spike morphology. Genet. Resour. Crop Ev., 62 (6), 837–852.
- Sweeney, M. T. (2006). Caught red-handed: Rc encodes a basic helix-loop-helix protein conditioning red pericarp in rice. Plant Cell, 18 (2), 283–294.
- Tadesse, W., Amri, A., Ogbonnaya, F. C., Sanchez-Garcia, M., Sohail, Q., Baum, M. (2015). Wheat. In: Genetic and Genomic Resources for Grain Cereals Improvement. Academic Press, Oxford, pp. 81–124.
- Taenzler, B., Esposti, R. F., Vaccino, P., Brandolini, A., Effgen, S., Heun, M., Schafer-Pregl, R., Borghi, B., Salamini, F. (2002). Molecular linkage map of Einkorn wheat: Mapping of storage-protein and soft-glume genes and bread-making quality QTLs. Genet. Res., 80 (2), 131–143.
- Takahashi, R., Hayashi, J. (1964). Linkage study of two complementary genes for brittle rachis in barley. Berichte des Ohara Instituts, 12, 99–105.
- Taketa, S., Amano, S., Tsujino, Y., Sato, T., Saisho, D., Kakeda, K., Nomura, M., Suzuki, T., Matsumoto, T., Sato, K., Kanamori, H., Kawasaki, S., Takeda, K. (2008). Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway. Proc. Natl. Acad. Sci. USA, 105 (10), 4062–4067.
- Taketa, S., Kikuchi, S., Awayama, T., Yamamoto, S., Ichii, M., Kawasaki, S. (2004). Monophyletic origin of naked barley inferred from molecular analyses of a marker closely linked to the naked caryopsis gene (nud). Theor. Appl. Gen., 108, 1236–1242.
- Taketa, S., Yuo, T., Yamashita, Y., Ozeki, M., Haruyama, N., Hidekazu, M., Kanamori, H., Matsumoto, T., Kakeda, K., Sato, K. (2013). Molecular mechanisms for covered vs. naked caryopsis in barley. In: Advance in Barley Sciences, Proceedings of 11th International Barley Genetics Symposium, Zhejiang, China, pp. 453–460.
- Unrau, J. (1950). The use of monosomes and nullisomes in cytogenetic studies of common wheat. Sci. Agri.,30, 66–89.
- Watanabe, N., Ikebata, N. (2000). The effects of homoeologous group 3 chromosomes on grain colour dependent seed dormancy and brittle rachis in tetraploid wheat. Euphytica, 115 (3), 215–220.
- Watanabe, N., Sugiyama, K., Yamagishi, Y., Sakata, Y. (2002). Comparative telosomic mapping of homoeologous genes for brittle rachis in tetraploid and hexaploid wheats. Hereditas, 137, 180–185.
- Watkins, A. E. (1930). Wheat species. J. Gen., 23, 173.
- Yu, S., Long, H., Deng, G., Pan, Z., Liang, J., Zeng, X., Tang, Y., Tashi, N., Yu, M. (2016). A single nucleotide polymorphism of nud converts the caryopsis type of barley (Hordeum vulgare L.). Plant Mol. Biol. Rep., 34 (1), 242–248.
- Zhang, Z., Belcram, H., Magdelenat, G., Couloux, A., Samain, S., Gill, S., Rasmussena, J. B., Barbed, V., Faris, J. D., Huneau, C. (2011). Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat. Proc. Natl. Acad. Sci. USA, 108 (46), 18737–18742.