Have a personal or library account? Click to login
Hitchhikers’ guide to analysing bird ringing data Cover

Hitchhikers’ guide to analysing bird ringing data

Open Access
|Jan 2016

References

  1. Allaire, J. J., Cheng, J., Xie, Y., McPherson, J., Chang, W., Allen, J., Wickham, H. & Hyndman, R. 2015. rmarkdown: Dynamic documents for R. R package version 0.5.1. – http://CRAN.R-project.org/package=rmarkdown
  2. American Statistical Association 1999. Ethical guidelines for statistical practice. – Alexandria (Virginia): American Statistical Association. Available: http:\\www.amstat.org\profession\index.cfm?fuse-action=ethicalstatistics
  3. Brown, M. & Oschadleus, D. 2008. The ongoing role of bird ringing in science – a review. – In: Harebottle, D. M., Craig, A. J. F. K., Anderson, M. D., Rakotomanana, H. & Muchai, M. (eds.) Proceedings of the 12th Pan-African Ornithological Congress, pp. 6–8.
  4. Cleveland, W. S. 1993. Visualizing data. – Hobart Press, Summit, NJ., pp. 346
  5. Crewe, T. L., McCracken, J. D., Taylor, P. D., Lepage, D. & Heagy, A. E. 2008. The Canadian Migration Monitoring Network-Réseau canadien de surveil-lance des migrations: ten-year report on monitoring landbird population change. – CMMN-RCSM Scientific Technical Report No. 1. Bird Studies Canada, Port Rowan, Ontario, pp. 69
  6. Dearborn, D. C. & Kark, S. 2010. Motivations for conserving urban biodiversity. – Conservation Biology 24(2): 432–440. DOI: 10.1111/j.1523-1739.2009.01328.x10.1111/j.1523-1739.2009.01328.x19775276
  7. de Jonge, E. & van der Loo, M. 2013. An introduction to data cleaning with R. – Statistics Netherlands, The Hague, pp. 53.
  8. Dingemanse, N. J., Both, C., Van Noordwijk, A. J., Rutten, A. L. & Drent, P. J. 2003. Natal dispersal and personalities in Great Tits (Parus major). – Proceedings of the Royal Society of London B: Biological Sciences 270(1516): 741–747. DOI: 10.1098/rspb.2002.230010.1098/rspb.2002.2300169130212713749
  9. Dragulescu, A. A. 2014. xlsx: Read, write, format Excel 2007 and Excel 97/2000/XP/2003 files. R package version 0.5.7. – http://CRAN.R-project.org/package=xlsx
  10. Elliott, A. C., Hynan, L. S., Reisch, J. S. & Smith, J. 2006. Preparing data for snalysis using microsoft excel. – Journal of Investigative Medicine 54(6): 334–341. DOI: 10.2310/6650.2006.0503810.2310/6650.2006.0503817134617
  11. Fox, J. 2005. The R Commander: A basic-statistics graphical user interface to R. – Journal of Statistical Software 19(9): 1–42. DOI: 10.18637/jss.v014.i0910.18637/jss.v014.i09
  12. Fox, J. & Weisberg, S. 2011. An {R} Companion to applied regression. 2nd ed. – Thousand Oaks CA. Sage, pp. 472
  13. Fowler, J. & Cohen, L. 1996. Statistics for ornithologists. – British Trust for Ornithology, pp. 155
  14. Freedman, D., Pisani, R. & Purves, R. 2007. Statistics. 4th ed. – W. W. Norton and Company, inc. New York, pp. 697
  15. Greenwood, J. J. D. 2009. 100 years of ringing in Britain and Ireland. – Ringing & Migration 24(3): 147–153. DOI: 10.1080/03078698.2009.967438510.1080/03078698.2009.9674385
  16. Harnos, A., Ágh, N., Kovács, Sz., Lang, Zs. & Csörgő, T. 2015a Increasing protandry in the spring migration of the Pied Flycatcher (Ficedula hypoleuca) in Central Europe. – Journal of Ornithology 156(2): 543–546. DOI 10.1007/s10336-014-1148-310.1007/s10336-014-1148-3
  17. Harnos, A., Lang, Zs., Fehérvári, P. & Csörgő, T. 2015b Sex and age dependent migratory phenology of the Pied Flycatcher in a stopover site in the Carpathian Basin. – Ornis Hungarica 23(2): 10–19. DOI: 10.1515/orhu-2015-001010.1515/orhu-2015-0010
  18. Ieno, E. N. & Zuur, A. F. 2015. A beginner’s guide to data exploration and visualisation with R. – Highland Statistics Ltd. Newburgh, pp. 160
  19. Kovács, Sz., Csörgő, T., Harnos, A., Fehérvári, P. & Nagy, K. 2011. Change in migration phenology and biometrics of two conspecific Sylvia species in Hungary. – Journal of Ornithology 152(2): 365–373. DOI: 10.1007/s10336-010-0596-7.10.1007/s10336-010-0596-7
  20. Kovács, Sz., Csörgő, T., Harnos, A., Fehérvári, P. & Nagy, K. 2012. Changes in migration phenology and biometrical traits of Reed, Marsh and Sedge Warblers. – Open Life Sciences 7(1): 115–125. DOI: 10.2478/s11535-011-0101-110.2478/s11535-011-0101-1
  21. Nowakowski, J. 2003. Catch numbers at ringing stations is a reflection of bird migration intensity, as exemplified by autumn movements of the Great Tit (Parus major). – Ring 25(1–2): 3–15. DOI: 10.2478/v10050-008-0070-610.2478/v10050-008-0070-6
  22. Osenkowski, J. E., Paton, P. W. C. & Kraus, D. 2012. Using long-term constant-effort banding data to monitor population trends of migratory birds: a 33-year assessment of adjacent coastal stations.–The Condor 114(3): 470–481. DOI: 10.1525/cond.2012.11016910.1525/cond.2012.110169
  23. Peach, W. J., Baillie, S. R. & Balmer, D. E. 1998. Long-term changes in the abundance of passerines in Britain and Ireland as measured by constant effort mist-netting. – Bird Study 45(3): 257–275. DOI: 10.1080/0006365980946109810.1080/00063659809461098
  24. Peach, W. J., Baille, S. R., & Buckland, S. T. 2004. Current practices in the British Trust for Ornithology Constant Effort Sites Scheme and comparisons of temporal changes in mist-net captures with changes in spot-mapping counts at the extensive scale. – Studies in Avian Biology. 29: 46–56.
  25. Pilastro, A., Macchio, S., Massi, A., Montemaggiori, A. & Spina, F. 1998. Spring migratory routes of eight trans-Saharan passerines through the central and western Mediterranean; results from a network of insular and coastal ringing sites. – Ibis 140(4): 591–598. DOI: 10.1111/j.1474-919X.1998.tb04704.x10.1111/j.1474-919X.1998.tb04704.x
  26. Preuss, N. O. 2001. Hans Christian Cornelius Mortensen: aspects of life and of the history of bird ringing. – Ardea 89(special issue): 1–6.
  27. R Core Team 2015a R: A language and environment for statistical computing. – R Foundation for Statistical Computing, Vienna, Austria, https://www.R-project.org/.
  28. R Core Team 2015b R Data Import/Export. – R Foundation for Statistical Computing, Vienna, Austria, https://www.R-project.org/.
  29. Reiczigel, J., Harnos, A. & Solymosi, N. 2014. Biostatisztika nem statisztikusoknak [Biostatistics for non statisticians]. – Pars Kft., Budapest, pp. 462. (in Hungarian)
  30. Robinson, R. A., Baillie, S. R. & Crick, H. Q. 2007. Weather dependent survival: implications of climate change for passerine population processes. – Ibis 149(2): 357–364. DOI: 0.1111/j.1474-919X.2006.00648.x10.1111/j.1474-919X.2006.00648.x
  31. Robinson, R. A., Julliard, R. & Saracco, J. F. 2009. Constant effort: studying avian population processes using standardised ringing. – Ringing and Migration 24: 199–204. DOI: 10.1080/03078698.2009.967439210.1080/03078698.2009.9674392
  32. Shahbaba, B. 2012. Biostatistics with R. – Springer-Verlag, New York, pp. 352, DOI:10.1007/978-1-4614-1302-810.1007/978-1-4614-1302-8
  33. Şekercioğlu, Ç. H. 2012. Promoting community-based bird monitoring in the tropics: conservation, research, environmental education, capacity-building, and local incomes. – Biological Conservation 151(1): 69–73. DOI: 10.1016/j.biocon.2011.10.02410.1016/j.biocon.2011.10.024
  34. Spector, P. 2008. Data manipulation with R. – Springer-Verlag, New York, pp. 154, DOI: 10.1007/978-0-387-74731-610.1007/978-0-387-74731-6
  35. Spina, F. 1999. Value of ringing information for bird conservation in Europe. – Ringing & Migration 19(1): 29–40. DOI: 10.1080/03078698.1999.967420910.1080/03078698.1999.9674209
  36. Thorup, K., Korner-Nievergelt, F., Cohen, E. B. & Baillie, S. R. 2014. Large-scale spatial analysis of ringing and re-encounter data to infer movement patterns: A review including methodological perspectives. – Methods in Ecology and Evolution 5(12): 1337–1350. DOI: 10.1111/2041-210X.1225810.1111/2041-210X.12258
  37. Van den Broeck, J., Argeseanu Cunningham S., Eeckels, R. & Herbst, K. 2005. Data cleaning: detecting, diagnosing, and editing data abnormalities. – PLoS Medicine 2(10): e267. p. 0966–0970. DOI: 10.1371/journal.pmed.002026710.1371/journal.pmed.0020267119804016138788
  38. Venables, W. N., Smith, D. M. & the R Core Team 2015. An introduction to R. pp. 99 – https://cran.r-project.org/
  39. Walther, B. A., Schäffer, N., Van Niekerk, A., Thuiller, W., Rahbek, C. & Chown, S. L. 2007. Modelling the winter distribution of a rare and endangered migrant, the Aquatic Warbler Acrocephalus paludicola. – Ibis 149(4): 701–714. DOI: 10.1111/j.1474-919X.2007.00690.x10.1111/j.1474-919X.2007.00690.x
DOI: https://doi.org/10.1515/orhu-2015-0018 | Journal eISSN: 2061-9588 | Journal ISSN: 1215-1610
Language: English
Page range: 163 - 188
Published on: Jan 13, 2016
Published by: MME/BirdLife Hungary
In partnership with: Paradigm Publishing Services
Publication frequency: 2 issues per year

© 2016 Andrea Harnos, Péter Fehérvári, Tibor Csörgő, published by MME/BirdLife Hungary
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.