
Figure 1
Map showing the location of the El Rancho-Empalme lagoon system. The dots indicate the sampling sites. The map shows the location of the shrimp farm which delivers effluents to El Rancho
Table 1
Characteristics of the El Rancho subsystem, type and surface water inputs-outputs
| Parameters | Unit | Non-variant values | Winter | Spring | Summer | Autumn | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Area | km² | 7.78 | |||||||||||
| Depth | m | 0.50 | |||||||||||
| Average system volume | m³ | 3,890,000 | |||||||||||
| Precipitation | - | 156 | - | 1,299 | |||||||||
| Evaporation | 30,007 | 40,012 | 56,428 | 27,051 | |||||||||
| Contribution from shrimp farm | m³ day | - | - | 31.3 | 31.3 | ||||||||
| Contribution from the sea | 30,007 | 39,857 | 54,461 | 25,752 | |||||||||
| Residence time | days | 0.9 | 0.4 | 1.6 | 0.5 |

Figure 2
Nonmetric Multidimensional Scaling (nMDS) was used to compare seasonal variation in the groups of samples based on water quality parameters for the El Rancho (A) and Empalme (B) subsystems. Nitrite, nitrate, ammonium, soluble phosphate, and chlorophyll a, were included in the multivariate analysis.
Table 2
Seasonal variability in water quality of the El Rancho-Empalme lagoon system
| Units | Spring | Summer | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| El Rancho | Empalme | El Rancho | Empalme | ||||||||||||||
| Mean | SD | min | max | Mean | SD | min | max | Mean | SD | min | max | Mean | SD | min | max | ||
| Temperature | °C | 19.6 | 0.28 | 19.04 | 19.94 | 20.38 | 0.34 | 19.87 | 21.25 | 30.15 | 1.33 | 28.5 | 32.24 | 31.16 | 1.26 | 29 | 33.94 |
| DO | mg l-1 | 6.26 | 0.53 | 5.65 | 7.07 | 6.84 | 0.5 | 6.02 | 7.66 | 4.21 | 0.83 | 3.19 | 5.83 | 4.76 | 1.06 | 3.03 | 7.14 |
| Salinity | PSU | 38.55 | 0.44 | 37.95 | 39.56 | 37.93 | 0.24 | 37.48 | 38.43 | 38.41 | 1.25 | 36.73 | 40.78 | 35.45 | 3.09 | 29.87 | 39.4 |
| NO2+NO3 | μM | 0.38 | 0.09 | 0.24 | 0.49 | 0.35 | 0.13 | 0.08 | 0.76 | 0.15 | 0.05 | 0.09 | 0.25 | 0.1 | 0.05 | 0.05 | 0.22 |
| NH4 | 0.52 | 0.3 | 0.2 | 1.12 | 0.49 | 0.48 | 0.1 | 2.44 | 0.51 | 0.35 | 0.07 | 1.16 | 0.46 | 0.49 | 0.01 | 2.3 | |
| PO4 | 1.4 | 0.24 | 0.91 | 1.73 | 1.63 | 0.19 | 1.2 | 1.97 | 0.96 | 0.2 | 0.69 | 1.44 | 0.84 | 0.19 | 0.55 | 1.26 | |
| Chl a | mg m-3 | 1.06 | 1.65 | 0.02 | 5.92 | 0.57 | 0.42 | 0.02 | 1.64 | 0.77 | 0.75 | 0.04 | 2.73 | 1.25 | 1.2 | 0 | 3.29 |
| Autumn | Winter | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| El Rancho | Empalme | El Rancho | Empalme | ||||||||||||||
| Mean | SD | min | max | Mean | SD | min | max | Mean | SD | min | max | Mean | SD | min | max | ||
| Temperature | °C | 24.07 | 1.75 | 22.45 | 26.5 | 23.84 | 2.15 | 20.22 | 26.98 | 18.43 | 0.65 | 17.29 | 18.99 | 19.76 | 0.89 | 18.57 | 22.22 |
| DO | mg l-1 | 37.18 | 0.48 | 36.77 | 37.96 | 37.19 | 0.24 | 36.71 | 37.61 | 6.33 | 0.42 | 5.72 | 7.24 | 6.55 | 0.66 | 5.46 | 8.21 |
| Salinity | PSU | 6.4 | 2.01 | 0.25 | 7.79 | 6.97 | 0.52 | 6.06 | 7.86 | 37.26 | 1.06 | 35.38 | 38.19 | 37.44 | 0.59 | 36.04 | 38.19 |
| NO2+NO3 | μM | 3.15 | 2.31 | 0.08 | 0.66 | 2.09 | 1.41 | 0.02 | 0.81 | 4.48 | 1.47 | 2.48 | 6.32 | 3.89 | 1.76 | 1.19 | 6.4 |
| NH4 | 0.85 | 0.82 | 0.01 | 3 | 0.83 | 0.97 | 0.02 | 3.55 | 7.58 | 2.61 | 4.6 | 11.42 | 6.5 | 2.7 | 3.12 | 13.56 | |
| PO4 | 0.9 | 1.16 | 0.45 | 4.56 | 0.64 | 0.24 | 0.44 | 1.29 | 2.22 | 0.38 | 1.75 | 3.05 | 2.07 | 0.47 | 1.29 | 3.05 | |
| Chl a | mg m-3 | 3.15 | 2.31 | 0.63 | 7.68 | 2.09 | 1.41 | 0.32 | 6.51 | 1.48 | 1.25 | 0.13 | 4.1 | 0.86 | 0.41 | 0.26 | 1.84 |

Figure 3
Box and whisker plot of the trophic state by TRIX index for the El Rancho-Empalme lagoon system during seasons. Median, quartiles, ranges, and outliers of data are shown for each event. The plot shows the trophic state levels and the impact of upwelling and shrimp farm effluents.