Have a personal or library account? Click to login
Microsatellite based genetic variation among the buffalo breed populations in Pakistan Cover

Microsatellite based genetic variation among the buffalo breed populations in Pakistan

Open Access
|Dec 2017

References

  1. 1. Abbas G.: Phylogenetic relationship among buffalo breeds of Pakistan using RAPD analysis. MSc Thesis. Depart. Anim. Breed. Genet., Univ. Agri. Faisalabad, Pakistan 2007.
  2. 2. Arora R., Lakhchaura P.R.B., Tantia M.S., Vijh R.K.: Genetic diversity analysis of two buffalo populations of northern India using microsatellite markers. J Anim Breed Genet 2004, 121, 111–118.10.1111/j.1439-0388.2004.00451.x
  3. 3. Babar M.E., Imran M., Nawaz M., Benkel B.F., Farid H., Jabeen R., Abdullah M., Javed M., Javed M.: Genetic identification of three Pakistani buffalo breeds through a homozygosity pattern in the PRKAG3 gene. Pak J Zool 2008, 40, 409–415.
  4. 4. Barker J.S.F., Moore S.S., Hetzel D.J.S., Evans D., Tan S.G., Byrne K.: Genetic diversity of Asian water buffalo (Bubalus bubalis): microsatellite variation and a comparison with protein-coding loci. Anim Genet 1997, 28, 103–115.10.1111/j.1365-2052.1997.00085.x9172308
  5. 5. Botstein D., White R.L., Skolnick M., Davis R.W.: Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 1980, 32, 314–331.
  6. 6. Bruford M.W., Bradley D.G., Luikart G.: DNA markers reveal the complexity of livestock domestication. Nature Rev Genet 2003, 4, 900–910.10.1038/nrg120314634637
  7. 7. Cañón J., García D., García-Atance M.A., Obexer-Ruff G., Lenstra J.A., Ajmone-Marsan P., Dunner S.: Geographical partitioning of goat diversity in Europe and the Middle East. Anim Genet 2006, 37 327–334.10.1111/j.1365-2052.2006.01461.x16879341
  8. 8. Consortium E.C.G.D.: Marker-assisted conservation of European cattle breeds: an evaluation. Anim Genet 2006, 37, 475–481.10.1111/j.1365-2052.2006.01511.x16978177
  9. 9. Crawford A.M., Cuthbertson R.P.: Mutations in sheep microsatellites. Genome Res 1996, 6, 876–879.10.1101/gr.6.9.8768889555
  10. 10. Elbeltagy A.R., Galal S., Abdelsalam A.Z., El-Keraby F.E., Blasi M., Mohamed M.M.: Biodiversity in Mediterranean buffalo using two microsatellite multiplexes. Livest Sci 2008, 114, 341–346.10.1016/j.livsci.2007.10.006
  11. 11. FAO: Animal production and health guidelines. Molecular genetic characterization of Animal Genetic Resources. Commission on Genetic Resources for Food and Agriculture Food and Agriculture Organization of the United Nations. Rome, Italy, 2011.
  12. 12. GOP: GEconomic Survey, 2006–2007. Economic Affairs Division, Government of Pakistan, Isalamabad 2007.
  13. 13. GOP: Economic Survey, 2007–2008. Economic Affairs Division, Government of Pakistan, Isalamabad 2008.
  14. 14. Hillel J., Groenen M.A.M., Tixier-Boichard M., Korol A.B., David L., Kirzhner V.M., Burke T., Barre-Dirie A., Crooijmans R.P.M.A., Elo K., Feldman M.W., Freidlin P.J., Mäki-Tanila A, Oortwijn M., Thomson P., Vignal A., Wimmers K., Weigend S.: Biodiversity of 52 chicken populations assessed by microsatellite typing of DNA pools. Genet Sel Evol 2003, 35, 533–357.10.1186/1297-9686-35-6-533269798012939204
  15. 15. Kathiravan P., Mishra B.P., Kataria R.S., Sadana D.K.: Evaluation of genetic architecture and mutation drift equilibrium of Marathwada buffalo population in Central India. Livest Sci 2008, 5, 13–17.
  16. 16. Khan M.S., Ahmad N., Khan M.A.: Genetic resources and diversity in dairy buffaloes of Pakistan. Pak Vet J 2007, 27, 201–207.
  17. 17. Kimura M., Crow J.F.: The number of alleles that can be maintained in a finite population. Genetics 1964, 49, 725–738.10.1093/genetics/49.4.725121060914156929
  18. 18. Kumar S., Gupta J., Kumar N., Dikshit K., Navani N., Jain P., Nagarajan M.: Genetic variation and relationships among eight Indian riverine buffalo breeds. Mol Ecol 2006, 15, 593–600.10.1111/j.1365-294X.2006.02837.x16499687
  19. 19. Levene H.: On a matching problem in genetics. Ann Math Stat 1949, 20, 91–94.10.1214/aoms/1177730093
  20. 20. Lindgren G., Backström N., Swinburne J., Hellborg L., Einarsson A., Sandberg K., Cothran G., Vilà C., Binns M., Ellegren H.: Limited number of patrilines in horse domestication. Nature Genet 2004, 36, 335–336.10.1038/ng1326
  21. 21. Manly B.F.J.: The statistics of natural selection on animal populations. Chapman and Hall, London 1985.10.1007/978-94-009-4840-2
  22. 22. Michelizzi V.N., Dodson M.V., Pan Z., Amaral M.E.J., Michal J.J., McLean D.J., Womack J.E., Jiang Z.: Water buffalo genome science comes of age. Int Biol Sci 2010, 6, 333–349.10.7150/ijbs.6.333
  23. 23. Mishra B.P., Kataria R.S., Bulandi S.S., Prakash B., Kathiravan P., Mukesh M., Sadana D.K.: Riverine status and genetic structure of Chilika buffalo of eastern India as inferred from cytogenetic and molecular marker-based analysis. J Anim Breed Genet 2009, 126, 69–79.10.1111/j.1439-0388.2008.00759.x
  24. 24. Moioli B., Georgoudis A., Napolitano F., Catillo G., Giubilei E., Lgda C., Hassanane M.: Genetic diversity between Italian, Greek, and Egyptian buffalo populations. Live Prod Sci 2001, 70, 203–211.10.1016/S0301-6226(01)00175-0
  25. 25. Mukesh M., Sodhi M., Bhatia S., Mishra B.P.: Genetic diversity of Indian native cattle breeds as analyzed with 20 microsatellite loci. J Anim Breed Genet 2004, 121, 416–424.10.1111/j.1439-0388.2004.00468.x
  26. 26. Nei M.: Genetic distance between populations. Amer Nat 1972, 106, 283–292.10.1086/282771
  27. 27. Nei M.: Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci U.S.A 1973, 70, 3321–3323.10.1073/pnas.70.12.33214272284519626
  28. 28. Nei M.: Mathematical models of speciation and genetic distance. In: Population Genetics and Ecology. Edited by Karlin S., Nevo E., Academic Press, New York, 1976, pp. 723–766.10.1016/B978-0-12-398560-6.50036-5
  29. 29. Nei M.: Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 1978, 89, 583–590.10.1093/genetics/89.3.583121385517248844
  30. 30. Peter C., Bruford M., Perez T., Dalamitra S., Hewitt G., Erhardt G.: Genetic diversity and subdivision of 57 European and Middle-Eastern sheep breeds. Anim Genet 2007, 38, 37–44.10.1111/j.1365-2052.2007.01561.x17257186
  31. 31. Sajid I.A.: Molecular genetic variation among Nili, Ravi and Nili-Ravi buffalo breeds. MSc Thesis. Dept. Anim. Breed. Genet., Univ. Agri. Faisalabad, Pakistan, 2005.
  32. 32. Sambrook J., Russell D.W.: Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York 2001.
  33. 33. SanCristobal M., Chevalet C., Haley C.S., Joosten R., Rattink A.P., Harlizius B., Groen M.A.M, Amigues Y., Boscher M.Y., Russell G., Law A., Davoli R., Russo V., Désautés A., Fimland E., Bagga M., Delgado J.V., Vega-Pla J.L., Martinez A.M., Ramos M., Glodek P., Meyer J.N., Gandini G.C., Matassino D., Plastow G.S., Siggens K.W., Laval G., Archibald A.L., Milan D., Hammond K., Cardellino R.: Genetic diversity within and between European pig breeds using microsatellite markers. Anim Genet 2006, 37, 189–198.10.1111/j.1365-2052.2005.01385.x16734675
  34. 34. Toro M.A., Fernández J., Caballero J.: Molecular characterization of breeds and its use in conservation. Livest Sci 2009, 120, 174–195.10.1016/j.livsci.2008.07.003
  35. 35. Weir B.S.: Inferences about linkage disequilibrium. Biometrics 1979, 35, 235–254.10.2307/2529947
  36. 36. Yeh F., Boyle C., Rongcai T., Ye Z.Y., Xian J.M.: A Microsoft window based free ware for population genetic analysis. University of Alberta, Edmonton (available at: http://www.ualberta.ca/~fyeh/). 1999.
  37. 37. Zhang Y., Sun D., Yu Y., Zhang Y.: Genetic diversity and differentiation of Chinese domestic buffalo based on 30 microsatellite markers. Anim Genet 2007, 38, 569–575.10.1111/j.1365-2052.2007.01648.x17980000
Language: English
Page range: 535 - 542
Submitted on: Jul 11, 2017
|
Accepted on: Nov 13, 2017
|
Published on: Dec 27, 2017
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2017 Tanveer Hussain, Masroor Ellahi Babar, Akhtar Ali, Asif Nadeem, Zia Ur Rehman, Muneeb M. Musthafa, Faiz MMT Marikar, published by National Veterinary Research Institute in Pulawy
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.