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Genetic polymorphisms of hemostatic factors and thrombotic risk in non BCR-ABL myeloproliferative neoplasms: A pilot study Cover

Genetic polymorphisms of hemostatic factors and thrombotic risk in non BCR-ABL myeloproliferative neoplasms: A pilot study

Open Access
|Jun 2017

Figures & Tables

Table 1

Primer sequences, restriction enzymes used for genotyping, and length of polymerase chain reaction-restriction fragment length polymorphism products [19-22].

SubstitutionPrimer Sequence (5’>3>)Restriction EnzymeDNA Fragment (bp)
Wild Type AllelePolymorphic Allele
GP Ia/IIaF: GTG TTT AAC TTG AAG ACA TATTaqI92; 23115
c.807C>TR: ACC TTG CAT ATT GAA TTG CTT
GP IbαF: GGC GAG TGT AAG GCA TCA GGAvaII223; 26249
c.-5T>CR: ACA CTT CAC ATG GAC TGG AT
GP IbαF: ACA CTT CAC ATG GAC TCC AT–A-520; B-480;
VNTRR: GGG TCA TTT CTG GAG CTC TCC-440; D-400
GP IbαF: GCC AGC CAC CTA GAA GTG AAHhaI; BsaHI245; 170;286; 245; 45
c.5/92C>T (HPA-2)R: AAA AGC AAA AGG CAG GAG GT116; 45
GP IIb/IIIaF: TTC TGA TTG CTG GAC TTC TCT TMspI223; 39; 6173; 50; 39; 6
PIA1/2R: TCT CTC CCC ATG GCA AAG AGT
GP VIF: ACA TCC ACA ACA GTC CAG TGHpaI120; 112;112; 95; 47; 25
c.13254T>CR: ATC GAG AAG TCT AGG CAG AG47
vWFF: AAG CCA GGA TTA GAA CCC GAG TCGKpnI276; 406682
c.24/1282A>GR: AAC TCC ATG GTT CTG GAT GTG GCG TTC
FVIIF: TCG CAT GAT TGC TAT GGG ACEcoRI284; 74284; 82
c.-323P0/10R: GTT GAC ATT CCC CAT GGG AC
β-FibrinogenF: GAA CAT TTT ACC TTA TGT GAA TTA AGGHindIII290; 194;379; 290
c.-148C>TR: GAA GCT CCA AGA AAC CAT CC185

[i] F: forward primer; R: reverse primer.

Table 2

Clinical characteristics.

CharacteristicsPatients With Thrombosis (n = 57)Patients Without Thrombosis (n = 51)p Value
Age: mean (SD)66.98 (13.42)60.17 (15.58)0.016a
Males: n (%)21 (45.7)25 (54.3)0.96b
Females: n (%)34 (54.8)28 (45.2)
Disease duration: months: median (min-max)28.0 (8.0-184.0)30.0 (14.0-180.0)0.70c
Spleen size, cm: median (min-max)14.60 (4.88)14.18 (3.37)0.87c
Hb (g/dL): mean (SD)14.68 (2.99)15.34 (3.05)0.26a
RBC count (1012/L): median (min-max)5.19 (2.75-7.34)5.17 (3.21-8.04)0.87c
PCV (L/L): median (min-max)0.45 (0.22-0.63)0.45 (0.31-0.64)0.50c
MCV (fL): median (min-max)83.0 (70.0-100.0)87.0 (65.0-101.0)0.02c
MCH (pg): median (min-max)27.0 (17.0-34.0)28.0 (23.0-33.0)0.048c
Platelet count (109/L): median (min-max)553.0 (21.0-1554.0)581.0 (164.0-1700.0)0.65c
WBC count (109/L): mean (SD)9.34 (1.46)9.46 (1.34)0.71a
Leukocyte count (109/L): median (min-max)10.14 (4.58-24.67)10.15 (4.00-22.00)0.64c
Monocyte count (109/L)L median (min-max)0.60 (0.10-1.39)0.60 (0.20-2.68)0.80c
Basophils (109/L): median (min-max)0.09 (0.00-0.36)0.08 (0.00-0.52)0.62c
BMI: mean (SD)26.56 (4.47)27.67 (5.04)0.30a
Diabetes mellitus: n (%)7 (70.0)3 (30.0)0.11b
Smoking: n (%)4 (50.0)4 (50.0)0.75b
JAK-2: n (%)41 (52.6)37 (47.4)0.002b
CALR: n (%)1 (11.1)8 (88.9)0.03b

SD: standard deviation; Hb: hemoglobin; RBC count: red blood cell count; PCV: packed cell volume; MCV: mean corpuscular volume;

MCH: mean corpuscular Hb; WBC count: white blood cell count; BMI: body mass index.

a t-Test for two independent samples.

b ζ2 Test for independence (homogeneity) of two features.

c Non-parametric Mann-Whitney U test.

c Non-parametric Mann-Whitney U test.

a t-Test for two independent samples.

c Non-parametric Mann-Whitney U test.

c Non-parametric Mann-Whitney U test.

c Non-parametric Mann-Whitney U test.

c Non-parametric Mann-Whitney U test.

c Non-parametric Mann-Whitney U test.

a t-Test for two independent samples.

c Non-parametric Mann-Whitney U test.

c Non-parametric Mann-Whitney U test.

c Non-parametric Mann-Whitney U test.

a t-Test for two independent samples.

b ζ2 Test for independence (homogeneity) of two features.

b ζ2 Test for independence (homogeneity) of two features.

b ζ2 Test for independence (homogeneity) of two features.

b ζ2 Test for independence (homogeneity) of two features.

Table 3

Thrombotic complications.

Thrombosis: n (%)
ET/PMFPVp Valuea
Arterial:36 (73.5)13 (26.5)0.03
     Cardiac (myocardial infarction)114NS
     Neurological (TIA and ischemic stroke)208NS
     Peripheral arterial thrombosis51NS
Venous:7 (50.0)7 (50.0)0.36
     Deep venous thrombosis43NS
     Pulmonary artery thrombosis01NS
     Splanchnic vein thrombosis33NS

ET: essential thrombocythemia; PMF: primary myelofibrosis; PV: polycythemia vera; NS: not significant; TIA: transient ischemic attack.

a ζ2 Test for independence (homogeneity) of two features.

Table 4

Distribution of polymorphisms in arterial and venous thrombosis.

PolymorphismsGP IIa/IIIa PIA1/2GP Ia/IIa c.807C>T
GenotypesTTTCCCCCCTTTCCCTTT
Arterial n (%)34 (47.2)12 (48.0)2 (28.6)44 (46.3)3 (37.5)1 (50.0)13 (38.2)23 (42.6)13 (65.0)
Venous n (%)10 (13.2)1 (4.0)2 (28.6)12 (12.6)0 (0.0)1 (50.0)5 (14.7)7 (13.0)2 (10.0)
PolymorphismsGP Ibα VNTRGP Ibα c.4T>C KozakGP VI c.13254T>C
GenotypesCCCDDDTTTCCCTTTCCC
Arterial n (%)41 (46.3)4 (57.1)4 (66.7)38 (48.1)11 (40.7)0 (0.0)43 (46.7)6 (37.5)0 (0.0)
Venous n (%)10 (10.6)2 (28.6)1 (16.7)11 (13.9)3 (11.1)0 (0.0)11 (12.0)3 (18.8)0 (0.0)
Polymorphismsβ-Fibrinogen c.-148C>TFVII c.-323P0/10vWF c.24/1282A>G
GenotypesCCCTTTP0/P0P0/10P10/10AAAGGG
Arterial n (%)18 (40.0)30 (57.7)a1 (12.5)29 (38.2)9 (69.2)b0 (0.0)39 (41.1)0 (0.0)0 (0.0)
Arterial n (%)5 (11.1)7 (13.5)1 (12.5)8 (10.5)2 (15.4)1 (100.0)12 (12.6)0 (0.0)0 (0.0)

FVII: coagulation factor VII; vWF: von Willebrand factor.

Data are presented as n (number) (%) in arterial and venous thrombosis groups. Comparisons reaching statistical significance are bold.

a p = 0.027.

b p Exact = 0.049 in total thrombosis.

Table 5

Multivariate logistic regression.

VariableORp Value95% CI-OR
TT of GP Ia/IIa c.807C>T3.830.0321.13-13.03
CT of β-Fibrinogen c.-148C>T2.720.0421.04-7.12
c.-323P0/10 + c.-323P10/10 of FVII3.440.080.86-13.69
Age1.030.0411.001-1.068
MCV0.960.0030.94-0.97

[i] OR: odds ratio; 95% CI: 95% confidence interval; MCV: mean corpuscular volume.

DOI: https://doi.org/10.1515/bjmg-2017-0005 | Journal eISSN: 2199-5761 (formerly 1311-0160) | Journal ISSN: 1311-0160
Language: English
Page range: 35 - 42
Published on: Jun 30, 2017
Published by: Macedonian Academy of Sciences and Arts
In partnership with: Paradigm Publishing Services

© 2017 R Dambrauskienė, R Gerbutavičius, R Ugenskienė, R Jankauskaitė, A Savukaitytė, R Šimoliūnienė, M Rudžianskienė, R Gerbutavičienė, E Juozaitytė, published by Macedonian Academy of Sciences and Arts
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