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Variants in mitochondrial tRNA gene may not be associated with thyroid carcinoma Cover

Variants in mitochondrial tRNA gene may not be associated with thyroid carcinoma

By: ,  ,  ,  ,  ,  ,  ,  ,  ,  ,   and    
Open Access
|Jul 2016

Figures & Tables

Mitochondrial tRNA mutations with standard nt numbering, arrows indicate the locations of mt-tRNA variants.

Table 1

Molecular characterization of mt-tRNA variants for thyroid cancer.

tRNAtRNAAsptRNAArgtRNALeu(CUN)tRNAIletRNAAla
Nt changesG7521AT10411CT10463CA12308GG4292CC4312TT5655C
Number of nts in tRNA47674434541
Positionacceptor armacceptor armacceptor armvariable loopanticodon armT armacceptor arm
Homoplasmy/heteroplasmyhomoplasmyhomoplasmyhomoplasmyhomoplasmyhomoplasmyhomoplasmyhomoplasmy
CI (%)13.521.194.293.310.019.071.2
G (wild type)(kcal/mol)‒10.59‒10.58‒10.86‒16.01‒8.98‒8.98‒18.47
G (mutant)(kcal/mol)‒11.11‒10.13‒10.13‒15.88‒9.06‒9.12‒18.81

CI: conservation index.

Phylogenetic conservation analysis of the A12308G variant (the arrow shows position 44 that corresponds to the A12308G variant).

DOI: https://doi.org/10.1515/bjmg-2015-0090 | Journal eISSN: 2199-5761 (formerly 1311-0160) | Journal ISSN: 1311-0160
Language: English
Page range: 59 - 64
Published on: Jul 9, 2016
Published by: Macedonian Academy of Sciences and Arts
In partnership with: Paradigm Publishing Services

© 2016 F Lv, G Qian, W You, H Lin, XF Wang, GS Qiu, YS Jiang, LX Pang, YM Kang, BF Jia, JZ Xu, Y Yu, published by Macedonian Academy of Sciences and Arts
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.