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Genotyping of Flax Genetic Resources by Mirna-Based Molecular Markers and Morphology Cover

Genotyping of Flax Genetic Resources by Mirna-Based Molecular Markers and Morphology

Open Access
|Feb 2016

References

  1. BARVKAR, V.T. - PARDESHI, V.C. - KALE, S. M. - QIU, S. - ROLLINS, M. - DATLA, R. - KADOO, N.Y. 2013. Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes. In Planta, vol. 237, pp. 1149-1161. DOI: 10.1007/ s00425-012-1833-5.10.1007/s00425-012-1833-523291876
  2. BEJ, S. - BASAK, J. 2014. MicroRNAs: The Potential Biomarkers in Plant Stress Response. In American Journal of Plant Sciences, vol. 5, pp. 748-759. http://dx.doi.org/10.4236/ajps.2014.55089.10.4236/ajps.2014.55089
  3. BRUTCH, N.B. - POROKHOVINOVA, E.A. 2011a. Links between the morphological and agronomic characters in hybrids of lines with different manifestation of these traits. In Bulletin of applied botany, of genetics and plant breeding, ST. Petersburg, vol. 167, pp. 78-89. ISSN 0202-3628.
  4. BRUTCH, N.B. - POROKHOVINOVA, E.A. 2011b. Method of comparative analysis used to asses the results of evaluating quantitative characters of plant accessions grown in different years (method of reduced average values). In Bulletin of applied botany, of genetics and plant breeding, ST. Petersburg, vol. 167, pp. 36-40. ISSN 0202-3628.
  5. DIEDERICHSEN, A. - FU, Y.B. 2008. Flax genetic diversity as the raw material for future success. In International Conference on flax and other bast plants. ID 51, pp. 270 -279. ISBN 978-0-9809664-0-4.
  6. DIEDERICHSEN, A. - RANEY, J.P. 2006. Seed color, seed weight and seed oil content in Linum usitatissimum L. accessions held by Plant Gene Resources of Canada. In Plant Breeding, vol. 125, no. 4, pp. 372-377.
  7. DIEDERICHSEN, A. 2001. Comparison of genetic diversity of flax (Linum usitatissimum L.) between Canadian cultivars and a world collection. In Plant Breeding, vol. 120, no. 4, pp. 360-362.
  8. ERSON-BENSAN, A.E. 2014. Introduction to MicroRNAs in Biological Systems. In YOUSEF, M. (Ed) - ALLMER, J. MicroRNA Biology and Computational Analysis. New Your: Springer Science+Business Media, pp. 1-14. ISBN 978-1-62703-747-1.
  9. FAO 1996. Report on the state of the world’s plant genetic resources for food and agriculture. F AO, Rome.
  10. FU, D. - MA, B. - MASON, A.S. - XIAO, M. - WEI, L. - AN, Z. 2013. MicroRNA-based molecular markers: a novel PCR-based genotyping technique in Brassica species. In Plant Breeding, vol. 132, pp. 375-381. DOI: 10.1111/pbr.12069.10.1111/pbr.12069
  11. GANIE, S.A. - MONDAL, T.K. 2015. Genome-wide development of novel miRNA-based microsatellite markers of rice (Oryza sativa) for genotyping applications. In Molecular Breeding, vol. 35, no. 51, pp. 1-12. DOI: 10.1007/s11032-015-0207-7.10.1007/s11032-015-0207-7
  12. HAMMER, K. - ARROWSMITH, N. - GLADIS, T.H. 2003. Agrobiodiverzity with emphasis on plant genetic resources. In Naturwissenchaften, vol. 90, pp. 241-250. DOI: 10.1007/s001 14-003-0433-4.
  13. HLAVAČKOVÁ, L. - RAŽNÁ, K. - ŽIAROVSKÁ, J. - BEŽO, M. - BJELKOVÁ, M. 2015. Application of miRNA-based markers in flax genotypes characterisation. In International Cooperation for the Future Agricultural Researches. Debrecen: University of Debrecen, pp. 37 -40. ISBN 978-963-473-816-9.
  14. CHEN, C. - RIDZON, D.A. - BROOMER, A.J. - ZHOU, Z. - LEE, D.H. et al. 2005. Real-time quantification of microRNAs by stem-loop RT-PCR. In Nucleic Acids Research, vol. 33, no. 20. DOI: 10.1093/nar/gni178.10.1093/nar/gni178129299516314309
  15. KULCHESKI, F.R. - MARCELINO-GUIMARAES, F.C. - NEPOMUCENO, A.L. - ABDELNOOR, R.V. - MARGIS, R. 2010. The use of microRNAs as reference genes for quantitative polymerase chain reaction in soybean. In Analytical Biochemistry, vol. 406, pp. 185-192. DOI: 10.1016/j.ab.2010.07.020.10.1016/j.ab.2010.07.02020670612
  16. MELNIKOVA, N.V. - KUDRYAVTSEVA, A.V. - ZELENIN, A.V. et al. 2014. Retrotransposon-based molecular markers for analysis of genetic diversity within the genus Linum. In BioMed Research International. http://dx.doi.org/10.1155/2014/231589.10.1155/2014/231589416340925243121
  17. MONDAL, T.K. - GANIE, S.A. 2014. Identification and characterization of salt responsive miRNA-SSR markers in rice (Oryza sativa). In Gene, vol. 535, pp. 204-209. http://dx.doi.org/10.1016/j.gene.2013.11.033.10.1016/j.gene.2013.11.03324315823
  18. NEUTELINGS, G. - FÉNART, S. - LUCAU-DANILA, A. - HAWKINS, S. 2012. Identification and characterization of miRNA and their potential targets in flax. In Journal of Plant Physiology, vol. 169, pp. 1754-1766. http://dx.doi.org/10.1016/j.jplph.2012.06.011.10.1016/j.jplph.2012.06.01122841625
  19. RAO, V.R. - HODGKIN, T. 2002. Genetic diversity and conservation and utilization of plant genetic resources. In Plant Cell, Tissue and Organ Culture, vol. 68, pp. 1-19.
  20. RAŽNÁ, K. - HLAVAČKOVÁ, L. - BEŽO, M. - ŽIAROVSKÁ, J. - HABÁN, M. - SLUKOVÁ, Z. - PERNIŠOVÁ, M. 2015. Application of the RAPD and miRNA markers in the genotyping of Silybum marianum (L.) Gaertn. In Acta phytotechnica et zootechnica, vol. 18, no. 4, pp. 83-89. DOI: 10.15414/afz.2015.18.04.83-89.10.15414/afz.2015.18.04.83-89
  21. RUBIO-SOMOZA, I. - WEIGEL, D. 2011. MicroRNA networks and developmental plasticity in plants. In Trends in Plant Science, vol. 16, no. 5, pp. 258-264. DOI: 10.1016/j.tplants.2011.03.001.10.1016/j.tplants.2011.03.00121466971
  22. SAGHAI-MAROOF, M.A. - SOLIMAN, K.M. - JORGENSEN, J.A. - ALLARD, R.W. 1984. Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics. In Proceedings of the National Academic of Sciences, vol. 81, pp. 80148018.
  23. SHEIDAI, M. - ZIAEE, S. - FARAHANI, F. - TALEBI, S.M. - NOORMOHAMMADI, Z. - FARAHANI, Y.H.A. 2014. Intra-specific genetic and morphological diversity in Linum album ( Linaceae). In Biologia, vol. 69, no. 1, pp. 32-39.
  24. SOTO-CERDA, B.J. - DIEDERICHSEN, A. - RAGUPATHY, R. - CLOUTIER, S. 2013. Genetic characterization of a core collection of flaqx (Linum usitatissimum L.) suitable for association mapping studies and evidence of divergent selection between fibre and linseed types. In BMC Plant Biology, vol. 13, pp. 1-14.
  25. SUNKAR, R. 2010. MicroRNAs with macro-effects on plant stress responses. In Seminars in Cell & Developmental Biology, vol. 21, pp. 805-81 1.
  26. YADAV, C.B.Y. - MUTHAMILARASAN, M. - PANDEY, G. - PRASAD, M. 2014. Development of novel microRNA- based genetic markers in foxtail millet for genotyping applications in related grass species. In Mollecular Breeding, vol. 34, pp. 2219-2224. DOI: 10.1007/s11032-014-0137-9.10.1007/s11032-014-0137-9
  27. ZHANG, L. - CHIA, J.M. - KUMARI, S. - STEIN, J.C. - LIU, Z. - NARECHANIA, A. - MAHER, C.A. - GUILL, K. - MCMULLEN, M.D. - WARE, D. 2009. A genome-wide characterization of microRNA genes in maize. In Plos Genetics, vol. 5, no. 11, e1000716. DOI:10.1371/journal.pgen.1000716. 10.1371/journal.pgen.1000716277344019936050
DOI: https://doi.org/10.1515/agri-2015-0018 | Journal eISSN: 1338-4376 | Journal ISSN: 0551-3677
Language: English
Page range: 129 - 138
Submitted on: Oct 20, 2015
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Published on: Feb 16, 2016
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2016 Katarína Ražná, Janka Nôžková, Lucia Hlavačková, Nina Brutch, Elizaveta Porokhovinova, Tatiana Shelenga, Andrey Pavlov, published by National Agricultural and Food Centre
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.